Arnold CD, Nemcko F, Woodfin AR, Wienerroither S, Vlasova A, Schleiffer A, Pagani M, Rath M, Stark A. A high-throughput method to identify trans-activation domains within transcription factor sequences, 2018

Tracks on UCSC browser
Short- and long- libraries, +1 frame
Short-library, all frames
Long-library, all frames

Raw data
tAD-seq short-library GFP- replicate 1: R1, FASTQ 45M R2, FASTQ 45M
tAD-seq short-library GFP- replicate 2: R1, FASTQ 603M R2, FASTQ 568M
tAD-seq short-library GFP+ replicate 1: R1, FASTQ 305M R2, FASTQ 328M
tAD-seq short-library GFP+ replicate 2: R1, FASTQ 624M R2, FASTQ 642M
tAD-seq long-library GFP- replicate 1: R1, FASTQ 69M R2, FASTQ 76M
tAD-seq long-library GFP- replicate 2: R1, FASTQ 45M R2, FASTQ 54M
tAD-seq long-library GFP+ replicate 1: R1, FASTQ 32M R2, FASTQ 35M
tAD-seq long-library GFP+ replicate 2: R1, FASTQ 12M R2, FASTQ 13M

Processed files
Custom linear genome containing 180 TF with flanking backbone sequence 2bit 270K
Coordinates of TF in the linear genome bigBed 62K

Genome coverage file, short library GFP-, frame +1 bigWig
Genome coverage file, short library GFP-, frame +2 bigWig
Genome coverage file, short library GFP-, frame +3 bigWig
Genome coverage file, short library GFP-, frame -1 bigWig
Genome coverage file, short library GFP-, frame -2 bigWig
Genome coverage file, short library GFP-, frame -3 bigWig
Genome coverage file, short library GFP+, frame +1 bigWig
Genome coverage file, short library GFP+, frame +2 bigWig
Genome coverage file, short library GFP+, frame +3 bigWig
Genome coverage file, short library GFP+, frame -1 bigWig
Genome coverage file, short library GFP+, frame -2 bigWig
Genome coverage file, short library GFP+, frame -3 bigWig
Genome coverage file, long library GFP-, frame +1 bigWig
Genome coverage file, long library GFP-, frame +2 bigWig
Genome coverage file, long library GFP-, frame +3 bigWig
Genome coverage file, long library GFP-, frame -1 bigWig
Genome coverage file, long library GFP-, frame -2 bigWig
Genome coverage file, long library GFP-, frame -3 bigWig
Genome coverage file, long library GFP+, frame +1 bigWig
Genome coverage file, long library GFP+, frame +2 bigWig
Genome coverage file, long library GFP+, frame +3 bigWig
Genome coverage file, long library GFP+, frame -1 bigWig
Genome coverage file, long library GFP+, frame -2 bigWig
Genome coverage file, long library GFP+, frame -3 bigWig

Links to data on GEO [GSE114387].